No. words: 1053; after pruning: 1027


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:467)  463  0.00 0.21 0.00  MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1        1   468 (68)  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   (48)   469     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   517 
   60    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1    11 
   68  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   450 
   80    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1    31 
   92  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   426 
  104    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1    55 
  140  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   378 
  144    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1    95 
  184  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   334 
  192    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   143 
  268  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   250 
  276    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   227 
  288  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   230 
  296    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   247 
  300  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   218 
  308    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   259 
  324  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   194 
  344    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   295 
  368  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   150 
  376    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   327 
  380  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   138 
  388    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   339 
  392  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   126 
  396    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   347 
  412  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1   106 
  420    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   371 
  428  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1    90 
  456    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   407 
  460  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1    58 
  492    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   443 
  504  C MoSU010R_D09_BE404240As02P018C03P018C091R1_073.ab1    14 
  508    MoSU010F_D09_BE404240As02P018C03P018C091F1_073.ab1   459 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0