No. words: 1288; after pruning: 1262


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.8 (1,1:488)  480  0.00 0.00 0.20  MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1        1   488 (163)  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   (149)   488     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   637 
  161    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1    12 
  169  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   469 
  209    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1    60 
  229  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   409 
  269    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   120 
  293  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   345 
  325    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   176 
  357  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   281 
  405    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   256 
  421  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   217 
  433    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   284 
  493  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   145 
  497    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   348 
  517  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1   121 
  549    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   400 
  573  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1    65 
  577    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   428 
  605  C MoSU010R_G09_BE404240Ld01P018C03P018C091R1_067.ab1    33 
  609    MoSU010F_G09_BE404240Ld01P018C03P018C091F1_067.ab1   460 
Contig length: old 799, new 800

Contig length: old 800, new 800
New start: 0