No. words: 1312; after pruning: 1286


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:492)  482  0.00 0.41 0.00  MoSU010F_A10_BE404240Ld03P018C03P018C091F1_080.ab1        1   492 (155)  C MoSU010R_A10_BE404240Ld03P018C03P018C091R1_080.ab1   (171)   494     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU010R_A10_BE404240Ld03P018C03P018C091R1_080.ab1   665 
  187    MoSU010F_A10_BE404240Ld03P018C03P018C091F1_080.ab1    15 
  191  C MoSU010R_A10_BE404240Ld03P018C03P018C091R1_080.ab1   475 
  199    MoSU010F_A10_BE404240Ld03P018C03P018C091F1_080.ab1    27 
  203  C MoSU010R_A10_BE404240Ld03P018C03P018C091R1_080.ab1   463 
  287    MoSU010F_A10_BE404240Ld03P018C03P018C091F1_080.ab1   114 
  307  C MoSU010R_A10_BE404240Ld03P018C03P018C091R1_080.ab1   359 
  359    MoSU010F_A10_BE404240Ld03P018C03P018C091F1_080.ab1   186 
Contig length: old 819, new 820

Contig length: old 820, new 820
New start: 0