No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:491)  482  0.00 0.20 0.20  MoSU010F_F10_BE404240Ld08P018C03P018C091F1_070.ab1        1   492 (182)  C MoSU010R_F10_BE404240Ld08P018C03P018C091R1_070.ab1   (156)   492     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU010R_F10_BE404240Ld08P018C03P018C091R1_070.ab1   648 
  177    MoSU010F_F10_BE404240Ld08P018C03P018C091F1_070.ab1    20 
  181  C MoSU010R_F10_BE404240Ld08P018C03P018C091R1_070.ab1   468 
  273    MoSU010F_F10_BE404240Ld08P018C03P018C091F1_070.ab1   116 
  301  C MoSU010R_F10_BE404240Ld08P018C03P018C091R1_070.ab1   348 
  341    MoSU010F_F10_BE404240Ld08P018C03P018C091F1_070.ab1   184 
  385  C MoSU010R_F10_BE404240Ld08P018C03P018C091R1_070.ab1   264 
  449    MoSU010F_F10_BE404240Ld08P018C03P018C091F1_070.ab1   292 
  481  C MoSU010R_F10_BE404240Ld08P018C03P018C091R1_070.ab1   168 
  497    MoSU010F_F10_BE404240Ld08P018C03P018C091F1_070.ab1   340 
  525  C MoSU010R_F10_BE404240Ld08P018C03P018C091R1_070.ab1   124 
  561    MoSU010F_F10_BE404240Ld08P018C03P018C091F1_070.ab1   404 
Contig length: old 830, new 831

Contig length: old 831, new 831
New start: 0