No. words: 1319; after pruning: 1293


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:492)  492  0.00 0.00 0.00  MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1        1   493 (163)  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   (170)   493     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   663 
  190    MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1    20 
  194  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   470 
  202    MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1    32 
  206  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   458 
  210    MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1    40 
  218  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   446 
  226    MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1    56 
  258  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   406 
  334    MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1   164 
  454  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   210 
  462    MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1   292 
  494  C MoSU010R_G10_BE404240Ld09P018C03P018C091R1_068.ab1   170 
  502    MoSU010F_G10_BE404240Ld09P018C03P018C091F1_068.ab1   332 
Contig length: old 826, new 826

Contig length: old 826, new 826
New start: 0