No. words: 644; after pruning: 618


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.0 (1,1:270)  267  0.00 0.00 0.00  MoSU010F_E11_BE405835At01P018B04P018B101F1_087.ab1        1   271 (53)  C MoSU010R_E11_BE405835At01P018B04P018B101R1_087.ab1   (49)   271     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  138 nodes

 71 str. conn. components

Path
    1  C MoSU010R_E11_BE405835At01P018B04P018B101R1_087.ab1   320 
  137    MoSU010F_E11_BE405835At01P018B04P018B101F1_087.ab1    88 
  177  C MoSU010R_E11_BE405835At01P018B04P018B101R1_087.ab1   144 
  193    MoSU010F_E11_BE405835At01P018B04P018B101F1_087.ab1   144 
Contig length: old 373, new 373

Contig length: old 373, new 373
New start: 0