No. words: 667; after pruning: 641


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.7 (1,1:259)  255  0.00 0.00 0.00  MoSU010F_A11_BE405835Tu01P018B04P018B101F1_095.ab1        1   260 (76)  C MoSU010R_A11_BE405835Tu01P018B04P018B101R1_095.ab1   (71)   260     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1  C MoSU010R_A11_BE405835Tu01P018B04P018B101R1_095.ab1   331 
  203    MoSU010F_A11_BE405835Tu01P018B04P018B101F1_095.ab1   132 
  219  C MoSU010R_A11_BE405835Tu01P018B04P018B101R1_095.ab1   113 
  235    MoSU010F_A11_BE405835Tu01P018B04P018B101F1_095.ab1   164 
Contig length: old 407, new 407

Contig length: old 407, new 407
New start: 0