No. words: 1540; after pruning: 1514


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:1129)  369  1.46 0.00 0.00  MoSU035F_H04_BE422954Ld10P019A04P019A101F1_018.ab1      520   929 (0)  C MoSU035R_H04_BE422954Ld10P019A04P019A101R1_018.ab1   (0)   611   202 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1    MoSU035F_H04_BE422954Ld10P019A04P019A101F1_018.ab1     1 
  655  C MoSU035R_H04_BE422954Ld10P019A04P019A101R1_018.ab1   476 
  675    MoSU035F_H04_BE422954Ld10P019A04P019A101F1_018.ab1   675 
  683  C MoSU035R_H04_BE422954Ld10P019A04P019A101R1_018.ab1   448 
Contig length: old 1130, new 1130

Contig length: old 1130, new 1130
New start: 0