No. words: 1189; after pruning: 1163


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:436)  429  0.00 0.00 0.23  MoSU008F_H07_BE424291Ld02P005E05E111F1_049.ab1        1   437 (164)  C MoSU008R_H07_BE424291Ld02P005E05E111R1_049.ab1   (152)   436     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C MoSU008R_H07_BE424291Ld02P005E05E111R1_049.ab1   588 
  304    MoSU008F_H07_BE424291Ld02P005E05E111F1_049.ab1   152 
Contig length: old 752, new 753

Contig length: old 753, new 753
New start: 0