No. words: 1175; after pruning: 1149


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:421)  418  0.00 0.00 0.00  MoSU008F_C08_BE424291Ld05P005E05E111F1_060.ab1        1   422 (177)  C MoSU008R_C08_BE424291Ld05P005E05E111R1_060.ab1   (154)   422     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1  C MoSU008R_C08_BE424291Ld05P005E05E111R1_060.ab1   576 
  182    MoSU008F_C08_BE424291Ld05P005E05E111F1_060.ab1    28 
  210  C MoSU008R_C08_BE424291Ld05P005E05E111R1_060.ab1   367 
  290    MoSU008F_C08_BE424291Ld05P005E05E111F1_060.ab1   136 
  294  C MoSU008R_C08_BE424291Ld05P005E05E111R1_060.ab1   283 
  474    MoSU008F_C08_BE424291Ld05P005E05E111F1_060.ab1   320 
Contig length: old 753, new 753

Contig length: old 753, new 753
New start: 0