No. words: 1716; after pruning: 1662


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.3 (1,1:1030)  621  1.02 0.44 0.15  MoSU013F_C01_BE424976As01P015E02P015E081F1_011.ab1      153   836 (0)  C MoSU013R_C01_BE424976As01P015E02P015E081R1_011.ab1   (0)   880   195 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1    MoSU013F_C01_BE424976As01P015E02P015E081F1_011.ab1     1 
  467  C MoSU013R_C01_BE424976As01P015E02P015E081R1_011.ab1   566 
  475    MoSU013F_C01_BE424976As01P015E02P015E081F1_011.ab1   475 
  567  C MoSU013R_C01_BE424976As01P015E02P015E081R1_011.ab1   466 
Contig length: old 1031, new 1032

Contig length: old 1032, new 1032
New start: 0