No. words: 1502; after pruning: 1476


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:1009)  428  2.65 0.20 0.00  MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1      313   803 (0)  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   (0)   699   208 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1     1 
  353  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   659 
  357    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   357 
  471  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   541 
  479    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   479 
  591  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   421 
  595    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   595 
  661  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   350 
  665    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   665 
  696  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   315 
  700    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   700 
  708  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   303 
  712    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   712 
  735  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   276 
  739    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   739 
  751  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   260 
  783    MoSU013F_E01_BE424976At01P015E02P015E081F1_007.ab1   783 
  791  C MoSU013R_E01_BE424976At01P015E02P015E081R1_007.ab1   220 
Contig length: old 1010, new 1010

Contig length: old 1010, new 1010
New start: 0