No. words: 1552; after pruning: 1526


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:1242)  294  0.00 0.00 0.00  MoSU013F_G01_BE424976Ld01P015E02P015E081F1_003.ab1      477   785 (0)  C MoSU013R_G01_BE424976Ld01P015E02P015E081R1_003.ab1   (0)   767   459 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1    MoSU013F_G01_BE424976Ld01P015E02P015E081F1_003.ab1     1 
  596  C MoSU013R_G01_BE424976Ld01P015E02P015E081R1_003.ab1   648 
  608    MoSU013F_G01_BE424976Ld01P015E02P015E081F1_003.ab1   608 
  620  C MoSU013R_G01_BE424976Ld01P015E02P015E081R1_003.ab1   624 
  624    MoSU013F_G01_BE424976Ld01P015E02P015E081F1_003.ab1   624 
  636  C MoSU013R_G01_BE424976Ld01P015E02P015E081R1_003.ab1   608 
  644    MoSU013F_G01_BE424976Ld01P015E02P015E081F1_003.ab1   644 
  648  C MoSU013R_G01_BE424976Ld01P015E02P015E081R1_003.ab1   596 
  652    MoSU013F_G01_BE424976Ld01P015E02P015E081F1_003.ab1   652 
  656  C MoSU013R_G01_BE424976Ld01P015E02P015E081R1_003.ab1   588 
Contig length: old 1243, new 1243

Contig length: old 1243, new 1243
New start: 0