No. words: 1712; after pruning: 1686


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:1246)  431  0.43 0.22 0.00  MoSU013F_B02_BE424976Ld04P015E02P015E081F1_014.ab1      465   928 (0)  C MoSU013R_B02_BE424976Ld04P015E02P015E081R1_014.ab1   (0)   784   320 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1    MoSU013F_B02_BE424976Ld04P015E02P015E081F1_014.ab1     1 
  604  C MoSU013R_B02_BE424976Ld04P015E02P015E081R1_014.ab1   645 
  616    MoSU013F_B02_BE424976Ld04P015E02P015E081F1_014.ab1   616 
  620  C MoSU013R_B02_BE424976Ld04P015E02P015E081R1_014.ab1   629 
Contig length: old 1247, new 1248

Contig length: old 1248, new 1248
New start: 0