No. words: 1719; after pruning: 1679


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.6 (1,1:1081)  609  0.31 0.16 0.00  MoSU013F_C02_BE424976Ld05P015E02P015E081F1_012.ab1      211   846 (0)  C MoSU013R_C02_BE424976Ld05P015E02P015E081R1_012.ab1   (0)   873   237 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1    MoSU013F_C02_BE424976Ld05P015E02P015E081F1_012.ab1     1 
  522  C MoSU013R_C02_BE424976Ld05P015E02P015E081R1_012.ab1   562 
Contig length: old 1082, new 1083

Contig length: old 1083, new 1083
New start: 0