No. words: 1306; after pruning: 1280


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 4.4 (1,1:1064)  222  0.42 0.42 0.42  MoSU013F_D02_BE424976Ld06P015E02P015E081F1_010.ab1      564   803 (0)  C MoSU013R_D02_BE424976Ld06P015E02P015E081R1_010.ab1   (0)   503   264 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  106 nodes

 55 str. conn. components

Path
    1    MoSU013F_D02_BE424976Ld06P015E02P015E081F1_010.ab1     1 
  692  C MoSU013R_D02_BE424976Ld06P015E02P015E081R1_010.ab1   375 
  700    MoSU013F_D02_BE424976Ld06P015E02P015E081F1_010.ab1   700 
  708  C MoSU013R_D02_BE424976Ld06P015E02P015E081R1_010.ab1   359 
Contig length: old 1065, new 1066

Contig length: old 1066, new 1066
New start: 0