No. words: 1438; after pruning: 1389


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:1045)  377  0.51 0.00 0.00  MoSU013F_A01_BE424976Tu01P015E02P015E081F1_015.ab1      338   729 (0)  C MoSU013R_A01_BE424976Tu01P015E02P015E081R1_015.ab1   (0)   709   318 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  188 nodes

 96 str. conn. components

Path
    1    MoSU013F_A01_BE424976Tu01P015E02P015E081F1_015.ab1     1 
  535  C MoSU013R_A01_BE424976Tu01P015E02P015E081R1_015.ab1   512 
Contig length: old 1046, new 1046

Contig length: old 1046, new 1046
New start: 0