No. words: 1294; after pruning: 1254


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:626)  587  0.16 0.00 0.00  MoSU009F_B04_BE426692Ld04P015D01P015D071F1_030.ab1       17   627 (56)  C MoSU009R_B04_BE426692Ld04P015D01P015D071R1_030.ab1   (0)   611     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1    MoSU009F_B04_BE426692Ld04P015D01P015D071F1_030.ab1     1 
   47  C MoSU009R_B04_BE426692Ld04P015D01P015D071R1_030.ab1   581 
   51    MoSU009F_B04_BE426692Ld04P015D01P015D071F1_030.ab1    51 
   83  C MoSU009R_B04_BE426692Ld04P015D01P015D071R1_030.ab1   545 
   87    MoSU009F_B04_BE426692Ld04P015D01P015D071F1_030.ab1    87 
  207  C MoSU009R_B04_BE426692Ld04P015D01P015D071R1_030.ab1   421 
  463    MoSU009F_B04_BE426692Ld04P015D01P015D071F1_030.ab1   463 
  495  C MoSU009R_B04_BE426692Ld04P015D01P015D071R1_030.ab1   133 
  579    MoSU009F_B04_BE426692Ld04P015D01P015D071F1_030.ab1   579 
  583  C MoSU009R_B04_BE426692Ld04P015D01P015D071R1_030.ab1    45 
  623    MoSU009F_B04_BE426692Ld04P015D01P015D071F1_030.ab1   623 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0