No. words: 1380; after pruning: 1354


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:625)  577  0.00 0.00 0.00  MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1       26   626 (153)  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1   (0)   601     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1     1 
   45  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1   582 
   49    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1    49 
   65  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1   562 
   73    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1    73 
   77  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1   550 
  457    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1   457 
  501  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1   126 
  577    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1   577 
  581  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1    46 
  585    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1   585 
  589  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1    38 
  593    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1   593 
  597  C MoSU009R_C04_BE426692Ld05P015D01P015D071R1_028.ab1    30 
  621    MoSU009F_C04_BE426692Ld05P015D01P015D071F1_028.ab1   621 
Contig length: old 779, new 779

Contig length: old 779, new 779
New start: 0