No. words: 1385; after pruning: 1345


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:627)  577  0.00 0.00 0.00  MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1       30   628 (158)  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1   (0)   599     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1     1 
   64  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1   565 
   92    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1    92 
  140  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1   489 
  192    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1   192 
  208  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1   421 
  292    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1   292 
  504  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1   125 
  516    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1   516 
  536  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1    93 
  540    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1   540 
  544  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1    85 
  580    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1   580 
  588  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1    41 
  596    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1   596 
  600  C MoSU009R_E04_BE426692Ld07P015D01P015D071R1_024.ab1    29 
  616    MoSU009F_E04_BE426692Ld07P015D01P015D071F1_024.ab1   616 
Contig length: old 786, new 786

Contig length: old 786, new 786
New start: 0 
S Change at: 707; seg lengths: entry 1, contig 1