No. words: 1380; after pruning: 1354


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:624)  555  1.00 0.00 0.17  MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1       26   626 (154)  C MoSU009R_H04_BE426692Ld10P015D01P015D071R1_018.ab1   (0)   600     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1    MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1     1 
   41  C MoSU009R_H04_BE426692Ld10P015D01P015D071R1_018.ab1   585 
   73    MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1    73 
   77  C MoSU009R_H04_BE426692Ld10P015D01P015D071R1_018.ab1   549 
  461    MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1   461 
  501  C MoSU009R_H04_BE426692Ld10P015D01P015D071R1_018.ab1   125 
  505    MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1   505 
  549  C MoSU009R_H04_BE426692Ld10P015D01P015D071R1_018.ab1    77 
  557    MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1   557 
  561  C MoSU009R_H04_BE426692Ld10P015D01P015D071R1_018.ab1    65 
  569    MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1   569 
  600  C MoSU009R_H04_BE426692Ld10P015D01P015D071R1_018.ab1    27 
  616    MoSU009F_H04_BE426692Ld10P015D01P015D071F1_018.ab1   616 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0