No. words: 1541; after pruning: 1515


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:861)  658  0.00 0.00 0.00  MoSU008F_H09_BE442619Ld02P005H05H111F1_065.ab1       70   748 (0)  C MoSU008R_H09_BE442619Ld02P005H05H111R1_065.ab1   (0)   793   115 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1    MoSU008F_H09_BE442619Ld02P005H05H111F1_065.ab1     1 
  413  C MoSU008R_H09_BE442619Ld02P005H05H111R1_065.ab1   450 
Contig length: old 862, new 862

Contig length: old 862, new 862
New start: 0