No. words: 1552; after pruning: 1526


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 13.9 (1,1:872)  644  0.00 0.15 0.15  MoSU008F_C10_BE442619Ld05P005H05H111F1_076.ab1      110   785 (3)  C MoSU008R_C10_BE442619Ld05P005H05H111R1_076.ab1   (0)   764    89 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1    MoSU008F_C10_BE442619Ld05P005H05H111F1_076.ab1     1 
  547  C MoSU008R_C10_BE442619Ld05P005H05H111R1_076.ab1   327 
Contig length: old 873, new 873

Contig length: old 873, new 873
New start: 0