No. words: 1498; after pruning: 1472


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:871)  603  0.16 0.00 0.00  MoSU008F_G10_BE442619Ld09P005H05H111F1_068.ab1       99   724 (0)  C MoSU008R_G10_BE442619Ld09P005H05H111R1_068.ab1   (0)   774   149 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1    MoSU008F_G10_BE442619Ld09P005H05H111F1_068.ab1     1 
  422  C MoSU008R_G10_BE442619Ld09P005H05H111R1_068.ab1   451 
  490    MoSU008F_G10_BE442619Ld09P005H05H111F1_068.ab1   490 
  514  C MoSU008R_G10_BE442619Ld09P005H05H111R1_068.ab1   359 
Contig length: old 872, new 872

Contig length: old 872, new 872
New start: 0 
S Change at: 719; seg lengths: entry 1, contig 1