No. words: 1034; after pruning: 1008


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:491)  467  0.20 0.20 0.00  MoSU026F_F11_BE442619Sn24P030E05P005H111F1_085.ab1        3   492 (51)  C MoSU026R_F11_BE442619Sn24P030E05P005H111R1_085.ab1   (0)   491     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU026R_F11_BE442619Sn24P030E05P005H111R1_085.ab1   491 
  118    MoSU026F_F11_BE442619Sn24P030E05P005H111F1_085.ab1   119 
  198  C MoSU026R_F11_BE442619Sn24P030E05P005H111R1_085.ab1   294 
  222    MoSU026F_F11_BE442619Sn24P030E05P005H111F1_085.ab1   223 
Contig length: old 543, new 542

Contig length: old 542, new 542
New start: 0