No. words: 1353; after pruning: 1327


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:638)  592  0.31 0.31 0.47  MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1        1   641 (34)  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   (38)   640     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   678 
   96    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1    56 
  108  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   571 
  192    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   152 
  200  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   479 
  240    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   200 
  256  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   423 
  296    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   256 
  328  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   351 
  368    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   328 
  384  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   295 
  396    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   356 
  400  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   279 
  408    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   368 
  452  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   227 
  464    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   424 
  500  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   179 
  516    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   476 
  528  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   151 
  552    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   512 
  556  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   123 
  572    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   532 
  576  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1   103 
  580    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   540 
  588  C MoSU028R_A09_BE442619Sn25P005H05P030D061R1_079.ab1    91 
  592    MoSU028F_A09_BE442619Sn25P005H05P030D061F1_079.ab1   552 
Contig length: old 714, new 715

Contig length: old 715, new 715
New start: 0