No. words: 1026; after pruning: 1000


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.9 (1,1:486)  469  0.00 0.00 0.00  MoSU026F_G11_BE442619Sn25P030E05P005H111F1_083.ab1        3   487 (47)  C MoSU026R_G11_BE442619Sn25P030E05P005H111R1_083.ab1   (7)   485     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU026R_G11_BE442619Sn25P030E05P005H111R1_083.ab1   492 
   38    MoSU026F_G11_BE442619Sn25P030E05P005H111F1_083.ab1    33 
   42  C MoSU026R_G11_BE442619Sn25P030E05P005H111R1_083.ab1   451 
   50    MoSU026F_G11_BE442619Sn25P030E05P005H111F1_083.ab1    45 
   54  C MoSU026R_G11_BE442619Sn25P030E05P005H111R1_083.ab1   439 
   70    MoSU026F_G11_BE442619Sn25P030E05P005H111F1_083.ab1    65 
   74  C MoSU026R_G11_BE442619Sn25P030E05P005H111R1_083.ab1   419 
   82    MoSU026F_G11_BE442619Sn25P030E05P005H111F1_083.ab1    77 
   94  C MoSU026R_G11_BE442619Sn25P030E05P005H111R1_083.ab1   399 
  118    MoSU026F_G11_BE442619Sn25P030E05P005H111F1_083.ab1   113 
Contig length: old 539, new 539

Contig length: old 539, new 539
New start: 0