No. words: 1018; after pruning: 992


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.1 (1,1:482)  460  0.21 0.00 0.00  MoSU026F_B12_BE442619Sn27P030E05P005H111F1_094.ab1        5   483 (44)  C MoSU026R_B12_BE442619Sn27P030E05P005H111R1_094.ab1   (12)   479     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU026R_B12_BE442619Sn27P030E05P005H111R1_094.ab1   491 
   48    MoSU026F_B12_BE442619Sn27P030E05P005H111F1_094.ab1    40 
   52  C MoSU026R_B12_BE442619Sn27P030E05P005H111R1_094.ab1   440 
  192    MoSU026F_B12_BE442619Sn27P030E05P005H111F1_094.ab1   184 
Contig length: old 535, new 535

Contig length: old 535, new 535
New start: 0