No. words: 1022; after pruning: 996


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.2 (1,1:483)  464  0.00 0.00 0.00  MoSU026F_C12_BE442619Sn28P030E05P005H111F1_092.ab1        5   484 (46)  C MoSU026R_C12_BE442619Sn28P030E05P005H111R1_092.ab1   (12)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU026R_C12_BE442619Sn28P030E05P005H111R1_092.ab1   492 
   40    MoSU026F_C12_BE442619Sn28P030E05P005H111F1_092.ab1    32 
   44  C MoSU026R_C12_BE442619Sn28P030E05P005H111R1_092.ab1   449 
   52    MoSU026F_C12_BE442619Sn28P030E05P005H111F1_092.ab1    44 
   56  C MoSU026R_C12_BE442619Sn28P030E05P005H111R1_092.ab1   437 
  112    MoSU026F_C12_BE442619Sn28P030E05P005H111F1_092.ab1   104 
  200  C MoSU026R_C12_BE442619Sn28P030E05P005H111R1_092.ab1   293 
  220    MoSU026F_C12_BE442619Sn28P030E05P005H111F1_092.ab1   212 
Contig length: old 538, new 538

Contig length: old 538, new 538
New start: 0