No. words: 1020; after pruning: 994


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:483)  447  1.45 0.00 0.00  MoSU026F_E12_BE442619Sn30P030E05P005H111F1_088.ab1        1   484 (45)  C MoSU026R_E12_BE442619Sn30P030E05P005H111R1_088.ab1   (7)   484     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C MoSU026R_E12_BE442619Sn30P030E05P005H111R1_088.ab1   491 
  190    MoSU026F_E12_BE442619Sn30P030E05P005H111F1_088.ab1   183 
Contig length: old 536, new 536

Contig length: old 536, new 536
New start: 0