No. words: 1347; after pruning: 1321


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.2 (1,1:629)  582  0.32 0.16 0.48  MoSU028F_C09_BE442619Sn31P005H05P030D061F1_075.ab1        5   632 (34)  C MoSU028R_C09_BE442619Sn31P005H05P030D061R1_075.ab1   (55)   626     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C MoSU028R_C09_BE442619Sn31P005H05P030D061R1_075.ab1   681 
  255    MoSU028F_C09_BE442619Sn31P005H05P030D061F1_075.ab1   204 
  259  C MoSU028R_C09_BE442619Sn31P005H05P030D061R1_075.ab1   423 
  283    MoSU028F_C09_BE442619Sn31P005H05P030D061F1_075.ab1   232 
  291  C MoSU028R_C09_BE442619Sn31P005H05P030D061R1_075.ab1   391 
  511    MoSU028F_C09_BE442619Sn31P005H05P030D061F1_075.ab1   460 
  515  C MoSU028R_C09_BE442619Sn31P005H05P030D061R1_075.ab1   167 
  551    MoSU028F_C09_BE442619Sn31P005H05P030D061F1_075.ab1   500 
Contig length: old 717, new 717

Contig length: old 717, new 717
New start: 0