No. words: 1028; after pruning: 1002


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:489)  465  0.00 0.41 0.00  MoSU026F_G12_BE442619Sn32P030E05P005H111F1_084.ab1        1   489 (47)  C MoSU026R_G12_BE442619Sn32P030E05P005H111R1_084.ab1   (1)   491     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU026R_G12_BE442619Sn32P030E05P005H111R1_084.ab1   492 
   47    MoSU026F_G12_BE442619Sn32P030E05P005H111F1_084.ab1    44 
   55  C MoSU026R_G12_BE442619Sn32P030E05P005H111R1_084.ab1   438 
   67    MoSU026F_G12_BE442619Sn32P030E05P005H111F1_084.ab1    64 
   75  C MoSU026R_G12_BE442619Sn32P030E05P005H111R1_084.ab1   418 
   91    MoSU026F_G12_BE442619Sn32P030E05P005H111F1_084.ab1    88 
   95  C MoSU026R_G12_BE442619Sn32P030E05P005H111R1_084.ab1   398 
  103    MoSU026F_G12_BE442619Sn32P030E05P005H111F1_084.ab1   100 
  135  C MoSU026R_G12_BE442619Sn32P030E05P005H111R1_084.ab1   358 
  187    MoSU026F_G12_BE442619Sn32P030E05P005H111F1_084.ab1   184 
Contig length: old 538, new 539

Contig length: old 539, new 539
New start: 0