No. words: 1011; after pruning: 985


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:474)  456  0.00 0.21 0.00  MoSU026F_A10_BE442619Ta11P030E05P005H111F1_080.ab1        1   475 (47)  C MoSU026R_A10_BE442619Ta11P030E05P005H111R1_080.ab1   (13)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C MoSU026R_A10_BE442619Ta11P030E05P005H111R1_080.ab1   489 
   39    MoSU026F_A10_BE442619Ta11P030E05P005H111F1_080.ab1    25 
   43  C MoSU026R_A10_BE442619Ta11P030E05P005H111R1_080.ab1   447 
   63    MoSU026F_A10_BE442619Ta11P030E05P005H111F1_080.ab1    49 
   75  C MoSU026R_A10_BE442619Ta11P030E05P005H111R1_080.ab1   415 
  119    MoSU026F_A10_BE442619Ta11P030E05P005H111F1_080.ab1   105 
  255  C MoSU026R_A10_BE442619Ta11P030E05P005H111R1_080.ab1   235 
  259    MoSU026F_A10_BE442619Ta11P030E05P005H111F1_080.ab1   245 
Contig length: old 536, new 536

Contig length: old 536, new 536
New start: 0