No. words: 1045; after pruning: 1019


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:477)  463  0.00 0.00 0.00  MoSU026F_B10_BE442619Ta12P030E05P005H111F1_078.ab1        1   478 (45)  C MoSU026R_B10_BE442619Ta12P030E05P005H111R1_078.ab1   (44)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1  C MoSU026R_B10_BE442619Ta12P030E05P005H111R1_078.ab1   522 
   96    MoSU026F_B10_BE442619Ta12P030E05P005H111F1_078.ab1    52 
  104  C MoSU026R_B10_BE442619Ta12P030E05P005H111R1_078.ab1   419 
  108    MoSU026F_B10_BE442619Ta12P030E05P005H111F1_078.ab1    64 
  116  C MoSU026R_B10_BE442619Ta12P030E05P005H111R1_078.ab1   407 
  132    MoSU026F_B10_BE442619Ta12P030E05P005H111F1_078.ab1    88 
Contig length: old 567, new 567

Contig length: old 567, new 567
New start: 0