No. words: 1179; after pruning: 1153


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.9 (1,1:639)  495  0.76 0.19 0.00  MoSU026F_B06_BE442619Ta18P005H05P030D061F1_046.ab1        1   526 (2)  C MoSU026R_B06_BE442619Ta18P005H05P030D061R1_046.ab1   (10)   641   115 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C MoSU026R_B06_BE442619Ta18P005H05P030D061R1_046.ab1   651 
   92    MoSU026F_B06_BE442619Ta18P005H05P030D061F1_046.ab1    81 
   96  C MoSU026R_B06_BE442619Ta18P005H05P030D061R1_046.ab1   556 
Contig length: old 651, new 651

Contig length: old 651, new 651
New start: 0