No. words: 1348; after pruning: 1322


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:638)  602  0.00 0.16 0.47  MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1        1   641 (31)  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1   (37)   639     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1   676 
  422    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   384 
  430  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1   247 
  518    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   480 
  522  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1   155 
  570    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   532 
  574  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1   103 
  578    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   540 
  582  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1    95 
  594    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   556 
  598  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1    79 
  606    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   568 
  610  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1    67 
  618    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   580 
  626  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1    51 
  630    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   592 
  634  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1    43 
  638    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   600 
  646  C MoSU026R_C06_BE442619Ta19P005H05P030D061R1_044.ab1    31 
  650    MoSU026F_C06_BE442619Ta19P005H05P030D061F1_044.ab1   612 
Contig length: old 709, new 710

Contig length: old 710, new 710
New start: 0