No. words: 1614; after pruning: 1588


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.1 (1,1:779)  720  0.90 0.13 0.13  MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1        5   780 (15)  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1   (43)   776     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1   819 
   55    MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1    16 
   71  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1   749 
   93    MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1    53 
  288  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1   532 
  296    MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1   256 
  452  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1   368 
  568    MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1   528 
  576  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1   244 
  720    MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1   680 
  728  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1    92 
  748    MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1   708 
  752  C MoSU026R_D03_BE442619Ta20P005H05P030A061R1_025.ab1    68 
  804    MoSU026F_D03_BE442619Ta20P005H05P030A061F1_025.ab1   764 
Contig length: old 834, new 835

Contig length: old 835, new 835
New start: 0 
S Change at: 120; seg lengths: entry 1, contig 1