No. words: 1292; after pruning: 1266


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.5 (1,1:618)  572  0.98 0.00 0.16  MoSU026F_D06_BE442619Ta20P005H05P030D061F1_042.ab1        5   619 (9)  C MoSU026R_D06_BE442619Ta20P005H05P030D061R1_042.ab1   (50)   614     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C MoSU026R_D06_BE442619Ta20P005H05P030D061R1_042.ab1   664 
  178    MoSU026F_D06_BE442619Ta20P005H05P030D061F1_042.ab1   132 
  182  C MoSU026R_D06_BE442619Ta20P005H05P030D061R1_042.ab1   483 
  660    MoSU026F_D06_BE442619Ta20P005H05P030D061F1_042.ab1   615 
Contig length: old 673, new 673

Contig length: old 673, new 673
New start: 0