No. words: 1342; after pruning: 1316


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:632)  597  0.16 0.16 0.32  MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1        1   634 (39)  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1   (36)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1   669 
   94    MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1    57 
  102  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1   568 
  118    MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1    81 
  122  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1   548 
  154    MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1   117 
  158  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1   512 
  178    MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1   141 
  234  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1   436 
  578    MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1   541 
  582  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1    88 
  618    MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1   581 
  626  C MoSU026R_E06_BE442619Ta21P005H05P030D061R1_040.ab1    44 
  650    MoSU026F_E06_BE442619Ta21P005H05P030D061F1_040.ab1   613 
Contig length: old 709, new 710

Contig length: old 710, new 710
New start: 0