No. words: 1224; after pruning: 1198


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:520)  492  0.77 0.00 0.00  MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1        1   521 (138)  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   (44)   521     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   565 
   88    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1    44 
   96  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   470 
  116    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1    72 
  124  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   442 
  132    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1    88 
  140  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   426 
  152    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   108 
  180  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   386 
  200    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   156 
  309  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   257 
  329    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   285 
  345  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   221 
  373    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   329 
  381  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   185 
  405    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   361 
  417  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1   149 
  501    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   457 
  509  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1    57 
  537    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   493 
  549  C MoSU026R_A04_BE442619Td01P005H05P030D061R1_032.ab1    17 
  557    MoSU026F_A04_BE442619Td01P005H05P030D061F1_032.ab1   513 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0