No. words: 1640; after pruning: 1600


Histogram of relative pair offsets, for read pairs with multiple alignments:
 0     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.8 (1,1:780)  743  0.13 0.00 0.13  MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1        5   781 (38)  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1   (45)   776     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1   821 
   65    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1    24 
  493  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1   329 
  569    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   528 
  577  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1   245 
  705    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   664 
  713  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1   109 
  717    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   676 
  729  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1    93 
  733    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   692 
  737  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1    85 
  749    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   708 
  757  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1    65 
  761    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   720 
  765  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1    57 
  786    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   745 
  790  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1    32 
  794    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   753 
  806  C MoSU026R_C01_BE442619Td03P005H05P030A061R1_011.ab1    16 
  810    MoSU026F_C01_BE442619Td03P005H05P030A061F1_011.ab1   769 
Contig length: old 859, new 860

Contig length: old 860, new 860
New start: 0