No. words: 1336; after pruning: 1310


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.0 (1,1:630)  591  0.16 0.00 0.48  MoSU026F_E04_BE442619Td05P005H05P030D061F1_024.ab1        5   633 (27)  C MoSU026R_E04_BE442619Td05P005H05P030D061R1_024.ab1   (50)   626     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C MoSU026R_E04_BE442619Td05P005H05P030D061R1_024.ab1   676 
  545    MoSU026F_E04_BE442619Td05P005H05P030D061F1_024.ab1   499 
  553  C MoSU026R_E04_BE442619Td05P005H05P030D061R1_024.ab1   124 
  569    MoSU026F_E04_BE442619Td05P005H05P030D061F1_024.ab1   523 
  577  C MoSU026R_E04_BE442619Td05P005H05P030D061R1_024.ab1   100 
  593    MoSU026F_E04_BE442619Td05P005H05P030D061F1_024.ab1   547 
  597  C MoSU026R_E04_BE442619Td05P005H05P030D061R1_024.ab1    80 
  605    MoSU026F_E04_BE442619Td05P005H05P030D061F1_024.ab1   559 
  609  C MoSU026R_E04_BE442619Td05P005H05P030D061R1_024.ab1    68 
  617    MoSU026F_E04_BE442619Td05P005H05P030D061F1_024.ab1   571 
  625  C MoSU026R_E04_BE442619Td05P005H05P030D061R1_024.ab1    52 
  645    MoSU026F_E04_BE442619Td05P005H05P030D061F1_024.ab1   599 
Contig length: old 705, new 706

Contig length: old 706, new 706
New start: 0