No. words: 1330; after pruning: 1304


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.8 (1,1:618)  589  0.00 0.00 0.16  MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1        5   619 (47)  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1   (50)   614     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1   664 
   86    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1    40 
  102  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1   563 
  158    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1   112 
  362  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1   303 
  514    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1   468 
  538  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1   127 
  546    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1   500 
  574  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1    91 
  578    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1   532 
  586  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1    79 
  590    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1   544 
  598  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1    67 
  618    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1   572 
  630  C MoSU026R_F04_BE442619Td06P005H05P030D061R1_022.ab1    35 
  638    MoSU026F_F04_BE442619Td06P005H05P030D061F1_022.ab1   592 
Contig length: old 711, new 712

Contig length: old 712, new 712
New start: 0