No. words: 1134; after pruning: 1108


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.8 (1,1:625)  452  1.03 0.00 0.00  MoSU026F_A05_BE442619Td09P005H05P030D061F1_047.ab1        3   486 (0)  C MoSU026R_A05_BE442619Td09P005H05P030D061R1_047.ab1   (24)   624   141 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C MoSU026R_A05_BE442619Td09P005H05P030D061R1_047.ab1   648 
Contig length: old 648, new 648

Contig length: old 648, new 648
New start: 0