No. words: 970; after pruning: 944


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 3.6 (1,1:314)  284  0.97 0.32 0.32  MoSU034F_H09_BE442797Ld02P019A03P019A091F1_065.ab1        3   311 (175)  C MoSU034R_H09_BE442797Ld02P019A03P019A091R1_065.ab1   (171)   313     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1  C MoSU034R_H09_BE442797Ld02P019A03P019A091R1_065.ab1   484 
  388    MoSU034F_H09_BE442797Ld02P019A03P019A091F1_065.ab1   218 
  396  C MoSU034R_H09_BE442797Ld02P019A03P019A091R1_065.ab1    89 
  432    MoSU034F_H09_BE442797Ld02P019A03P019A091F1_065.ab1   262 
  444  C MoSU034R_H09_BE442797Ld02P019A03P019A091R1_065.ab1    41 
  448    MoSU034F_H09_BE442797Ld02P019A03P019A091F1_065.ab1   278 
Contig length: old 655, new 656

Contig length: old 656, new 656
New start: 0