No. words: 960; after pruning: 934


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.1 (1,1:320)  304  0.00 0.31 0.31  MoSU034F_F10_BE442797Ld08P019A03P019A091F1_070.ab1        1   321 (169)  C MoSU034R_F10_BE442797Ld08P019A03P019A091R1_070.ab1   (149)   321     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  156 nodes

 80 str. conn. components

Path
    1  C MoSU034R_F10_BE442797Ld08P019A03P019A091R1_070.ab1   470 
  296    MoSU034F_F10_BE442797Ld08P019A03P019A091F1_070.ab1   146 
  320  C MoSU034R_F10_BE442797Ld08P019A03P019A091R1_070.ab1   151 
  360    MoSU034F_F10_BE442797Ld08P019A03P019A091F1_070.ab1   210 
  388  C MoSU034R_F10_BE442797Ld08P019A03P019A091R1_070.ab1    83 
  416    MoSU034F_F10_BE442797Ld08P019A03P019A091F1_070.ab1   266 
Contig length: old 639, new 640

Contig length: old 640, new 640
New start: 0