No. words: 707; after pruning: 681


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.2 (1,1:313)  297  0.00 0.32 0.32  MoSU034F_A09_BE442797Tu01P019A03P019A091F1_079.ab1        1   314 (30)  C MoSU034R_A09_BE442797Tu01P019A03P019A091R1_079.ab1   (49)   314     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C MoSU034R_A09_BE442797Tu01P019A03P019A091R1_079.ab1   363 
  148    MoSU034F_A09_BE442797Tu01P019A03P019A091F1_079.ab1    98 
  156  C MoSU034R_A09_BE442797Tu01P019A03P019A091R1_079.ab1   208 
  168    MoSU034F_A09_BE442797Tu01P019A03P019A091F1_079.ab1   118 
  180  C MoSU034R_A09_BE442797Tu01P019A03P019A091R1_079.ab1   184 
  192    MoSU034F_A09_BE442797Tu01P019A03P019A091F1_079.ab1   142 
  204  C MoSU034R_A09_BE442797Tu01P019A03P019A091R1_079.ab1   160 
  208    MoSU034F_A09_BE442797Tu01P019A03P019A091F1_079.ab1   158 
  216  C MoSU034R_A09_BE442797Tu01P019A03P019A091R1_079.ab1   148 
  224    MoSU034F_A09_BE442797Tu01P019A03P019A091F1_079.ab1   174 
  288  C MoSU034R_A09_BE442797Tu01P019A03P019A091R1_079.ab1    76 
  316    MoSU034F_A09_BE442797Tu01P019A03P019A091F1_079.ab1   266 
Contig length: old 393, new 394

Contig length: old 394, new 394
New start: 0