No. words: 1274; after pruning: 1248


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:483)  427  2.07 0.00 0.21  MoSU005F_A08_BE442982Ld03P015C03C091F1_053.ab1        1   484 (180)  C MoSU005R_A08_BE442982Ld03P015C03C091R1_053.ab1   (127)   483     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C MoSU005R_A08_BE442982Ld03P015C03C091R1_053.ab1   610 
  137    MoSU005F_A08_BE442982Ld03P015C03C091F1_053.ab1    10 
  150  C MoSU005R_A08_BE442982Ld03P015C03C091R1_053.ab1   461 
  154    MoSU005F_A08_BE442982Ld03P015C03C091F1_053.ab1    27 
Contig length: old 790, new 791

Contig length: old 791, new 791
New start: 0 
S Change at: 133; seg lengths: entry 1, contig 1