No. words: 543; after pruning: 517


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.4 (1,1:226)  208  0.00 0.44 0.44  MoSU032F_F03_BE442982Ta22P015C03P024E081F1_021.ab1        1   227 (42)  C MoSU032R_F03_BE442982Ta22P015C03P024E081R1_021.ab1   (47)   227     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  108 nodes

 56 str. conn. components

Path
    1  C MoSU032R_F03_BE442982Ta22P015C03P024E081R1_021.ab1   274 
  145    MoSU032F_F03_BE442982Ta22P015C03P024E081F1_021.ab1    97 
  149  C MoSU032R_F03_BE442982Ta22P015C03P024E081R1_021.ab1   126 
  169    MoSU032F_F03_BE442982Ta22P015C03P024E081F1_021.ab1   121 
  177  C MoSU032R_F03_BE442982Ta22P015C03P024E081R1_021.ab1    98 
  181    MoSU032F_F03_BE442982Ta22P015C03P024E081F1_021.ab1   133 
  189  C MoSU032R_F03_BE442982Ta22P015C03P024E081R1_021.ab1    86 
  197    MoSU032F_F03_BE442982Ta22P015C03P024E081F1_021.ab1   149 
  201  C MoSU032R_F03_BE442982Ta22P015C03P024E081R1_021.ab1    74 
  205    MoSU032F_F03_BE442982Ta22P015C03P024E081F1_021.ab1   157 
  237  C MoSU032R_F03_BE442982Ta22P015C03P024E081R1_021.ab1    38 
  249    MoSU032F_F03_BE442982Ta22P015C03P024E081F1_021.ab1   201 
Contig length: old 316, new 317

Contig length: old 317, new 317
New start: 0