No. words: 607; after pruning: 581


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.3 (1,1:256)  238  0.78 0.39 0.00  MoSU032F_C04_BE442982Td03P015C03P024G081F1_028.ab1        1   257 (42)  C MoSU032R_C04_BE442982Td03P015C03P024G081R1_028.ab1   (50)   258     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  120 nodes

 62 str. conn. components

Path
    1  C MoSU032R_C04_BE442982Td03P015C03P024G081R1_028.ab1   308 
   97    MoSU032F_C04_BE442982Td03P015C03P024G081F1_028.ab1    46 
  133  C MoSU032R_C04_BE442982Td03P015C03P024G081R1_028.ab1   176 
  145    MoSU032F_C04_BE442982Td03P015C03P024G081F1_028.ab1    94 
Contig length: old 350, new 350

Contig length: old 350, new 350
New start: 0